Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_1929Methylmalonyl-CoA mutase. (623 aa)    
Predicted Functional Partners:
RPD_1922
LAO/AO transport system ATPase.
 
 0.997
RPD_1927
methylmalonyl-CoA mutase.
 
0.997
RPD_2869
methylmalonyl-CoA epimerase.
 
  
 0.984
RPD_1532
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
    
 0.920
RPD_4010
2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
  
  
 0.917
RPD_1531
Pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase, beta subunit.
  
  
 0.916
sucC
succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.915
sucD
succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
 0.912
RPD_4011
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
     
 0.904
RPD_4009
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
     
 0.903
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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