STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_1941Conserved hypothetical protein. (200 aa)    
Predicted Functional Partners:
RPD_1986
Gene transfer agent (GTA) orfg11.
  
  
 0.793
RPD_1964
Protein of unknown function DUF264.
 
     0.772
RPD_1976
Protein of unknown function DUF264.
 
     0.772
RPD_1970
Phage major capsid protein, HK97.
  
  
 0.768
RPD_1984
Gene transfer agent (GTA) orfg10.
  
     0.767
RPD_1983
Gene transfer agent (GTA) orf.
  
     0.766
RPD_1966
Phage portal protein, HK97.
  
    0.765
RPD_1993
Gene transfer agent (GTA) orfg15.
 
  
 0.759
RPD_1991
Phage conserved hypothetical protein BR0599.
 
     0.758
RPD_1987
Conserved hypothetical protein.
  
    0.756
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.