STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_2018ATP-binding region, ATPase-like. (771 aa)    
Predicted Functional Partners:
RPD_3039
Response regulator receiver.
 0.993
RPD_3038
Response regulator receiver modulated diguanylate cyclase.
 0.984
RPD_4076
Hpt sensor hybrid histidine kinase.
 
 
0.971
RPD_1497
Hpt sensor hybrid histidine kinase.
 
 
0.958
RPD_2046
ATP-binding region, ATPase-like.
 
 
0.934
RPD_3866
Two component transcriptional regulator, LuxR family.
 
 0.930
RPD_2811
Transketolase, central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.928
RPD_0119
Sensor histidine kinase with PAS/PAC.
 
 
0.917
RPD_0284
PAS/PAC sensor hybrid histidine kinase.
 
 
0.917
RPD_3277
PAS/PAC sensor hybrid histidine kinase.
 
 
0.917
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.