Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_20692-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (532 aa)    
Predicted Functional Partners:
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 
 0.989
leuD
3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
 
 
 0.986
RPD_3886
Branched chain amino acid aminotransferase.
  
 0.977
RPD_1102
Aminotransferase, class IV.
  
 0.970
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
 
 
 0.960
ilvD-2
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
 
 
 0.959
RPD_0959
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
  
 
 0.948
RPD_2100
Acetolactate synthase, small subunit.
 
 
 0.943
RPD_2070
Thiamine pyrophosphate enzyme-like TPP-binding.
  
 
 0.935
RPD_1127
Phosphate butyryltransferase.
  
 
 0.932
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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