Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_2092MgtC/SapB transporter. (169 aa)    
Predicted Functional Partners:
RPD_1772
Calcium-binding EF-hand.
   
 
 0.700
RPD_0848
MgtC/SapB transporter.
 
 
0.678
RPD_2093
Uncharacterised peroxidase-related; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.608
RPD_2017
Outer membrane autotransporter barrel.
   
 
 0.572
RPD_1820
Cytochrome P450.
    
 0.567
RPD_1349
Conserved hypothetical protein.
  
    0.531
RPD_1455
DoxX.
   
  0.489
RPD_2945
DoxX.
   
  0.489
RPD_1735
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.479
mntH
NRAMP family Mn2+/Fe2+ transporters; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
 0.477
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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