node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_0692 | RPD_2306 | RPD_0692 | RPD_2306 | Protein of unknown function YGGT. | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.572 |
RPD_0692 | proC | RPD_0692 | RPD_3882 | Protein of unknown function YGGT. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.430 |
RPD_2302 | RPD_2303 | RPD_2302 | RPD_2303 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Benzoate transporter. | 0.806 |
RPD_2302 | RPD_2304 | RPD_2302 | RPD_2304 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Transcriptional regulator, GntR family. | 0.716 |
RPD_2302 | RPD_2306 | RPD_2302 | RPD_2306 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.756 |
RPD_2302 | glyA | RPD_2302 | RPD_2305 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.465 |
RPD_2303 | RPD_2302 | RPD_2303 | RPD_2302 | Benzoate transporter. | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | 0.806 |
RPD_2303 | RPD_2304 | RPD_2303 | RPD_2304 | Benzoate transporter. | Transcriptional regulator, GntR family. | 0.834 |
RPD_2303 | RPD_2306 | RPD_2303 | RPD_2306 | Benzoate transporter. | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.516 |
RPD_2303 | glyA | RPD_2303 | RPD_2305 | Benzoate transporter. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.443 |
RPD_2304 | RPD_2302 | RPD_2304 | RPD_2302 | Transcriptional regulator, GntR family. | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | 0.716 |
RPD_2304 | RPD_2303 | RPD_2304 | RPD_2303 | Transcriptional regulator, GntR family. | Benzoate transporter. | 0.834 |
RPD_2304 | RPD_2306 | RPD_2304 | RPD_2306 | Transcriptional regulator, GntR family. | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.668 |
RPD_2304 | glyA | RPD_2304 | RPD_2305 | Transcriptional regulator, GntR family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.528 |
RPD_2306 | RPD_0692 | RPD_2306 | RPD_0692 | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Protein of unknown function YGGT. | 0.572 |
RPD_2306 | RPD_2302 | RPD_2306 | RPD_2302 | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | 0.756 |
RPD_2306 | RPD_2303 | RPD_2306 | RPD_2303 | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Benzoate transporter. | 0.516 |
RPD_2306 | RPD_2304 | RPD_2306 | RPD_2304 | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Transcriptional regulator, GntR family. | 0.668 |
RPD_2306 | RPD_2859 | RPD_2306 | RPD_2859 | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Conserved hypothetical protein; Belongs to the radical SAM superfamily. RlmN family. | 0.511 |
RPD_2306 | RPD_3877 | RPD_2306 | RPD_3877 | Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Protein of unknown function DUF152; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.744 |