STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_24371-Cys peroxiredoxin. (209 aa)    
Predicted Functional Partners:
RPD_0520
Periplasmic protein thiol.
  
 0.949
RPD_0935
Thioredoxin-like.
  
 0.949
RPD_3416
Thiol-disulfide isomerase and thioredoxins.
  
 0.944
RPD_4027
Peroxiredoxin-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.923
RPD_1453
Thioredoxin reductase.
  
 
 0.880
RPD_1645
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.880
RPD_0617
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.769
RPD_3834
Ferritin and Dps; Belongs to the Dps family.
  
  
 0.769
RPD_3256
Catalase.
  
 
 0.765
tal
Glucose-6-phosphate isomerase / transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.751
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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