STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_2580Conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
RPD_1664
Conserved hypothetical protein.
  
     0.763
RPD_2083
Radical SAM.
 
  
 0.748
RPD_0465
Putative AlgJ protein, required for O-acetylation of alginate in Pseudomonas aeruginosa.
  
     0.743
RPD_2017
Outer membrane autotransporter barrel.
  
     0.737
RPD_2799
Conserved hypothetical protein.
  
     0.733
RPD_0459
Histidine kinase, HAMP region.
  
     0.732
RPD_3871
Late embryogenesis abundant protein.
 
    0.732
RPD_3054
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like.
  
     0.726
RPD_2702
Protein of unknown function DUF1211.
  
     0.722
RPD_3849
Outer membrane autotransporter barrel.
  
     0.713
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.