Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_2803Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (376 aa)    
Predicted Functional Partners:
RPD_2802
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.978
RPD_2569
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.918
RPD_2310
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.843
RPD_2570
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.839
RPD_2571
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.839
RPD_2681
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.832
RPD_3330
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.832
RPD_3780
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.831
RPD_1792
Putative efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.823
RPD_3139
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.813
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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