STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_3149Binding-protein-dependent transport systems inner membrane component. (315 aa)    
Predicted Functional Partners:
RPD_3150
Binding-protein-dependent transport systems inner membrane component.
 
 0.980
RPD_3148
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.979
RPD_3151
Extracellular solute-binding protein, family 1.
 
 
 0.958
RPD_3323
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.899
RPD_2907
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.898
RPD_2908
Binding-protein-dependent transport systems inner membrane component.
 
 0.898
ugpC
ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.897
RPD_3320
Binding-protein-dependent transport systems inner membrane component.
 
 0.897
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.894
RPD_4065
Binding-protein-dependent transport systems inner membrane component.
 
 0.712
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.