STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_3151Extracellular solute-binding protein, family 1. (426 aa)    
Predicted Functional Partners:
RPD_3150
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.962
RPD_3149
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.958
RPD_3148
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.893
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.820
RPD_0185
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.812
RPD_3321
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.789
RPD_3320
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.785
cpdA
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.772
RPD_2909
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.768
RPD_2908
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.763
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.