Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_3304Short chain enoyl-CoA hydratase. (256 aa)    
Predicted Functional Partners:
RPD_3300
Enoyl-CoA hydratase/isomerase.
 
  
 
0.773
RPD_3106
acyl-CoA dehydrogenase-like.
  
 0.708
RPD_0932
3-hydroxyacyl-CoA dehydrogenase.
 0.676
RPD_3301
acyl-CoA dehydrogenase-like.
  
 0.660
RPD_3303
Transcriptional regulator, TetR family.
       0.617
RPD_3609
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.616
RPD_3302
Methylmalonate-semialdehyde dehydrogenase (acylating).
  
 0.613
RPD_3299
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
  
 0.611
RPD_3105
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.602
RPD_3306
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.602
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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