Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_3366Protein of unknown function DUF1328. (57 aa)    
Predicted Functional Partners:
RPD_1374
CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
  
 0.910
RPD_4077
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.792
RPD_2934
Protein of unknown function DUF1328.
  
     0.729
RPD_1344
CBS:transport associated.
  
  
 0.721
RPD_1491
Transport-associated.
  
  
 0.704
RPD_3367
ATP-dependent DNA helicase, Rep family.
       0.444
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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