RPD_3533 protein (Rhodopseudomonas palustris BisB5)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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Score

RPD_3533

Binding-protein-dependent transport systems inner membrane component. (369 aa)

Predicted Functional Partners:

RPD_3532

0.984

RPD_3534

0.973

RPD_3535

0.967

RPD_3530

0.938

RPD_2625

0.823

RPD_1149

0.728

RPD_1150

0.704

RPD_4026

0.676

RPD_1813

0.672

RPD_4025

0.606

Your Current Organism:

Rhodopseudomonas palustris BisB5

NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPD_1149	RPD_1150	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.994
RPD_1149	RPD_1813	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.945
RPD_1149	RPD_2625	ABC transporter related; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 5.	0.617
RPD_1149	RPD_3532	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.755
RPD_1149	RPD_3533	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.728
RPD_1149	RPD_3534	ABC transporter related; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 5.	0.603
RPD_1149	RPD_3535	ABC transporter related; Belongs to the ABC transporter superfamily.	Twin-arginine translocation pathway signal.	0.617
RPD_1149	RPD_4025	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.957
RPD_1150	RPD_1149	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.994
RPD_1150	RPD_3530	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.954
RPD_1150	RPD_3533	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.704
RPD_1150	RPD_3535	Binding-protein-dependent transport systems inner membrane component.	Twin-arginine translocation pathway signal.	0.422
RPD_1150	RPD_4026	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.975
RPD_1813	RPD_1149	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.945
RPD_1813	RPD_3530	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.874
RPD_1813	RPD_3533	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.672
RPD_1813	RPD_4026	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.939
RPD_2625	RPD_1149	Extracellular solute-binding protein, family 5.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.617
RPD_2625	RPD_3530	Extracellular solute-binding protein, family 5.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.758
RPD_2625	RPD_3532	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.827