STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_3556ABC transporter related. (237 aa)    
Predicted Functional Partners:
RPD_3558
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.977
RPD_3557
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.969
RPD_3555
ABC transporter related.
 
  
0.924
RPD_2363
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.885
RPD_1517
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.871
RPD_1778
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.853
RPD_1779
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.842
RPD_1140
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.827
RPD_1849
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.825
RPD_2362
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.823
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.