RPD_3563 protein (Rhodopseudomonas palustris BisB5)

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Score

RPD_3563

Protein of unknown function DUF892. (166 aa)

Predicted Functional Partners:

RPD_0617

0.637

RPD_3490

0.605

RPD_3564

0.502

RPD_2161

0.452

ku

0.446

ku-2

0.440

Your Current Organism:

Rhodopseudomonas palustris BisB5

NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPD_0617	RPD_3563	RPD_0617	RPD_3563	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	Protein of unknown function DUF892.	0.637
RPD_2161	RPD_3490	RPD_2161	RPD_3490	ATP dependent DNA ligase.	ATP dependent DNA ligase.	0.932
RPD_2161	RPD_3563	RPD_2161	RPD_3563	ATP dependent DNA ligase.	Protein of unknown function DUF892.	0.452
RPD_2161	ku	RPD_2161	RPD_0154	ATP dependent DNA ligase.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.840
RPD_2161	ku-2	RPD_2161	RPD_3491	ATP dependent DNA ligase.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.840
RPD_3490	RPD_2161	RPD_3490	RPD_2161	ATP dependent DNA ligase.	ATP dependent DNA ligase.	0.932
RPD_3490	RPD_3563	RPD_3490	RPD_3563	ATP dependent DNA ligase.	Protein of unknown function DUF892.	0.605
RPD_3490	ku	RPD_3490	RPD_0154	ATP dependent DNA ligase.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.949
RPD_3490	ku-2	RPD_3490	RPD_3491	ATP dependent DNA ligase.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.974
RPD_3563	RPD_0617	RPD_3563	RPD_0617	Protein of unknown function DUF892.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.637
RPD_3563	RPD_2161	RPD_3563	RPD_2161	Protein of unknown function DUF892.	ATP dependent DNA ligase.	0.452
RPD_3563	RPD_3490	RPD_3563	RPD_3490	Protein of unknown function DUF892.	ATP dependent DNA ligase.	0.605
RPD_3563	RPD_3564	RPD_3563	RPD_3564	Protein of unknown function DUF892.	Carbohydrate-selective porin OprB.	0.502
RPD_3563	ku	RPD_3563	RPD_0154	Protein of unknown function DUF892.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.446
RPD_3563	ku-2	RPD_3563	RPD_3491	Protein of unknown function DUF892.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.440
RPD_3564	RPD_3563	RPD_3564	RPD_3563	Carbohydrate-selective porin OprB.	Protein of unknown function DUF892.	0.502
ku	RPD_2161	RPD_0154	RPD_2161	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	ATP dependent DNA ligase.	0.840
ku	RPD_3490	RPD_0154	RPD_3490	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	ATP dependent DNA ligase.	0.949
ku	RPD_3563	RPD_0154	RPD_3563	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Protein of unknown function DUF892.	0.446
ku	ku-2	RPD_0154	RPD_3491	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Conserved hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.904