STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4024Binding-protein-dependent transport systems inner membrane component. (313 aa)    
Predicted Functional Partners:
RPD_4025
Binding-protein-dependent transport systems inner membrane component.
  
 0.980
RPD_4026
ABC transporter related; Belongs to the ABC transporter superfamily.
  
 0.968
RPD_1150
Binding-protein-dependent transport systems inner membrane component.
  
 0.929
RPD_1812
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.
 
 
 0.927
RPD_1811
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.
 
 0.926
RPD_1813
Binding-protein-dependent transport systems inner membrane component.
  
 0.921
RPD_4022
Extracellular solute-binding protein, family 5.
 
 
 0.904
RPD_1149
ABC transporter related; Belongs to the ABC transporter superfamily.
  
 0.875
RPD_1152
Extracellular solute-binding protein, family 5.
 
 0.868
RPD_1815
Extracellular solute-binding protein, family 5.
 
 0.835
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.