RPD_4053 protein (Rhodopseudomonas palustris BisB5)

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Score

RPD_4053

Isocitrate lyase. (545 aa)

Predicted Functional Partners:

glcB

0.997

RPD_1127

0.951

RPD_0525

0.940

RPD_4135

0.938

sucC

0.932

sucD

0.923

RPD_0780

0.914

RPD_0217

0.907

RPD_4136

0.903

RPD_4137

0.903

Your Current Organism:

Rhodopseudomonas palustris BisB5

NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPD_0217	RPD_0780	RPD_0217	RPD_0780	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	Serine--glyoxylate transaminase.	0.921
RPD_0217	RPD_4053	RPD_0217	RPD_4053	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	Isocitrate lyase.	0.907
RPD_0217	RPD_4135	RPD_0217	RPD_4135	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	Protein of unknown function DUF224, cysteine-rich region.	0.908
RPD_0217	RPD_4136	RPD_0217	RPD_4136	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	FAD linked oxidase-like.	0.912
RPD_0217	RPD_4137	RPD_0217	RPD_4137	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	D-lactate dehydrogenase (cytochrome).	0.912
RPD_0217	glcB	RPD_0217	RPD_1375	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.917
RPD_0525	RPD_4053	RPD_0525	RPD_4053	Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.	Isocitrate lyase.	0.940
RPD_0525	sucC	RPD_0525	RPD_0536	Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.	succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.654
RPD_0525	sucD	RPD_0525	RPD_0539	Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.	succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.677
RPD_0780	RPD_0217	RPD_0780	RPD_0217	Serine--glyoxylate transaminase.	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	0.921
RPD_0780	RPD_4053	RPD_0780	RPD_4053	Serine--glyoxylate transaminase.	Isocitrate lyase.	0.914
RPD_0780	RPD_4135	RPD_0780	RPD_4135	Serine--glyoxylate transaminase.	Protein of unknown function DUF224, cysteine-rich region.	0.917
RPD_0780	RPD_4136	RPD_0780	RPD_4136	Serine--glyoxylate transaminase.	FAD linked oxidase-like.	0.920
RPD_0780	RPD_4137	RPD_0780	RPD_4137	Serine--glyoxylate transaminase.	D-lactate dehydrogenase (cytochrome).	0.909
RPD_0780	glcB	RPD_0780	RPD_1375	Serine--glyoxylate transaminase.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.926
RPD_1127	RPD_4053	RPD_1127	RPD_4053	Phosphate butyryltransferase.	Isocitrate lyase.	0.951
RPD_1127	glcB	RPD_1127	RPD_1375	Phosphate butyryltransferase.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.988
RPD_1127	sucC	RPD_1127	RPD_0536	Phosphate butyryltransferase.	succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.	0.866
RPD_1127	sucD	RPD_1127	RPD_0539	Phosphate butyryltransferase.	succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.874
RPD_4053	RPD_0217	RPD_4053	RPD_0217	Isocitrate lyase.	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.	0.907