RPD_4063 protein (Rhodopseudomonas palustris BisB5)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

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gene fusions

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[Homology]

Score

RPD_4063

Extracellular solute-binding protein, family 1. (599 aa)

Predicted Functional Partners:

RPD_4065

0.997

RPD_4066

0.992

RPD_4067

0.992

RPD_4068

0.991

RPD_4064

0.939

RPD_4070

0.666

RPD_4069

0.657

RPD_0185

0.572

RPD_2909

0.572

RPD_3149

0.572

Your Current Organism:

Rhodopseudomonas palustris BisB5

NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPD_0185	RPD_4063	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1.	0.572
RPD_0185	RPD_4065	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.662
RPD_0185	RPD_4067	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.664
RPD_0185	RPD_4068	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.632
RPD_2909	RPD_4063	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1.	0.572
RPD_2909	RPD_4065	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.731
RPD_2909	RPD_4067	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.713
RPD_2909	RPD_4068	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.659
RPD_3149	RPD_4063	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1.	0.572
RPD_3149	RPD_4065	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.718
RPD_3149	RPD_4067	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.704
RPD_3149	RPD_4068	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.649
RPD_4063	RPD_0185	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.572
RPD_4063	RPD_2909	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.572
RPD_4063	RPD_3149	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.572
RPD_4063	RPD_4064	Extracellular solute-binding protein, family 1.	Conserved hypothetical protein.	0.939
RPD_4063	RPD_4065	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPD_4063	RPD_4066	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.992
RPD_4063	RPD_4067	Extracellular solute-binding protein, family 1.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.992
RPD_4063	RPD_4068	Extracellular solute-binding protein, family 1.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.991