STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4113Hypothetical protein. (251 aa)    
Predicted Functional Partners:
RPD_3878
Conserved hypothetical protein.
  
     0.762
RPD_3893
Conserved hypothetical protein.
  
     0.753
RPD_3101
Conserved hypothetical protein.
  
     0.746
RPD_4311
Conserved hypothetical protein.
  
     0.740
RPD_2616
Conserved hypothetical protein.
  
     0.721
RPD_4112
Microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62.
 
     0.720
RPD_1447
PAS/PAC sensor signal transduction histidine kinase.
  
     0.710
RPD_0825
Conserved hypothetical protein.
  
     0.705
RPD_1766
Conserved hypothetical protein.
  
     0.704
RPD_1641
Conserved hypothetical protein.
  
     0.702
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.