Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_4178Protein of unknown function DUF344. (324 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.966
RPD_4219
OmpW.
   
    0.627
RPD_4177
Pyridoxal-dependent decarboxylase.
  
    0.549
RPD_1486
Bacteriochlorophyll 4-vinyl reductase.
   
    0.535
RPD_4175
Conserved hypothetical protein.
       0.516
RPD_4176
Conserved hypothetical protein.
       0.516
RPD_2951
Ppx/GppA phosphatase.
 
  
 0.469
RPD_0731
Cytochrome c oxidase, cbb3-type, subunit II.
   
    0.446
RPD_1485
Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.425
RPD_2352
Coproporphyrinogen III oxidase, anaerobic.
  
    0.425
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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