Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_4222Tetratricopeptide TPR_2. (254 aa)    
Predicted Functional Partners:
RPD_0566
C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; Belongs to the peptidase S41A family.
    
 
 0.802
RPD_3425
Conserved hypothetical protein.
  
     0.635
RPD_0996
Conserved hypothetical protein.
  
     0.628
RPD_1992
Putative phage cell wall peptidase, NlpC/P60.
   
 
 0.626
RPD_3528
NLP/P60.
   
 
 0.626
RPD_0145
Conserved hypothetical protein.
  
     0.617
RPD_1959
Conserved hypothetical protein.
 
     0.582
RPD_0702
TRAP transporter solute receptor, TAXI family.
 
     0.580
RPD_3068
Conserved hypothetical protein.
  
     0.578
RPD_3250
Conserved hypothetical protein.
  
    0.568
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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