Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4245DSBA oxidoreductase. (210 aa)    
Predicted Functional Partners:
RPD_4244
Protein-disulfide reductase.
  
 
 0.935
RPD_4246
ErfK/YbiS/YcfS/YnhG.
  
  
 0.780
RPD_4242
ATP-binding region, ATPase-like.
 
   
 0.663
RPD_1197
Twin-arginine translocation pathway signal.
 
   
 0.623
RPD_0326
Conserved hypothetical protein.
  
 
 0.562
RPD_4243
Response regulator receiver.
     
 0.545
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.448
RPD_0959
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
       0.432
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.