Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RPD_4254Sulfur compound chelating protein SoxZ. (109 aa)    
Predicted Functional Partners:
RPD_4255
Thiosulfate-binding protein SoxY.
 
 
 0.999
RPD_4256
Conserved hypothetical protein.
 
  
 0.993
RPD_4252
Sulfur dehydrogenase subunit SoxC.
 
  
 0.992
RPD_4251
Sulfur dehydrogenase subunit SoxD.
 
  
 0.991
RPD_4253
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
  
 0.991
RPD_4257
Conserved hypothetical protein.
 
  
 0.987
RPD_2072
Cytochrome c, class I.
    
 0.947
RPD_1154
Sulfate adenylyltransferase subunit 2.
     
 0.911
RPD_3457
3-mercaptopyruvate sulfurtransferase.
    
 0.907
cysC
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     
 0.904
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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