Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_4293Acetamidase/Formamidase. (332 aa)    
Predicted Functional Partners:
RPD_1203
Putative CoA transferase, subunit A.
     
  0.900
RPD_1204
Putative CoA transferase, subunit B.
     
  0.900
RPD_2746
Nitrile hydratase, alpha subunit.
     
  0.900
RPD_2747
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
     
  0.900
acyP
Acylphosphatase.
     
  0.900
RPD_4292
Putative urea/short-chain amide transport system substrate-binding protein.
 
     0.835
RPD_0984
Amidohydrolase 2.
     
  0.800
RPD_0988
Methylitaconate delta2-delta3-isomerase.
     
  0.800
RPD_4290
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.793
RPD_4294
Amidase; Belongs to the amidase family.
  
  
 0.757
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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