STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4344Protein of unknown function DUF1465. (171 aa)    
Predicted Functional Partners:
RPD_3514
TadE-like.
  
     0.764
RPD_3516
Conserved hypothetical protein.
  
     0.758
RPD_3518
Peptidase A24A, prepilin type IV.
  
     0.756
RPD_3278
Type IV pilus assembly PilZ.
  
     0.755
RPD_3521
Type IV pili component-like.
  
     0.749
RPD_3515
TadE-like.
  
     0.746
RPD_3522
Putative pilus assembly protein cpaE.
  
     0.746
RPD_1242
Conserved hypothetical protein.
  
     0.737
RPD_3243
Conserved hypothetical protein.
  
   
 0.736
RPD_3847
Protein of unknown function DUF1153.
  
     0.731
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.