Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4360Glyoxalase/bleomycin resistance protein/dioxygenase. (143 aa)    
Predicted Functional Partners:
RPD_4359
Transcriptional regulator, TetR family.
 
    0.900
RPD_4361
Protein of unknown function DUF81.
       0.743
RPD_4151
RNA polymerase ECF-type sigma factor.
  
    0.537
RPD_2860
Transcriptional regulator, TetR family.
 
    0.508
RPD_0968
TPR repeat.
  
    0.506
RPD_1716
Transcriptional regulator.
  
    0.500
RPD_2341
NmrA-like.
  
     0.438
cobB-2
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
    0.400
RPD_3631
Conserved hypothetical protein, interruption-N.
  
    0.400
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.