STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4367ABC transporter related. (236 aa)    
Predicted Functional Partners:
RPD_4369
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.962
RPD_4370
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.954
RPD_4368
ABC transporter related.
 
  
0.884
RPD_4371
Twin-arginine translocation pathway signal.
 
  
 0.856
RPD_2363
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.822
RPD_0052
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.815
RPD_1517
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.794
RPD_1588
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.785
RPD_0053
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.784
RPD_3558
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.777
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.