STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_4373Extracellular solute-binding protein, family 1. (437 aa)    
Predicted Functional Partners:
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.980
RPD_0185
Binding-protein-dependent transport systems inner membrane component.
 
 0.978
ugpC
ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.933
RPD_0186
Extracellular solute-binding protein, family 1.
  
  
 
0.904
RPD_3150
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.713
RPD_3149
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.696
RPD_3323
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.639
RPD_2909
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.635
RPD_3321
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.631
RPD_2908
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.613
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.