Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPB_0130 | RPB_1038 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter related; Belongs to the ABC transporter superfamily. | 0.751 |
RPB_0130 | RPB_1040 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.850 |
RPB_0130 | RPB_1041 | Binding-protein-dependent transport systems inner membrane component. | Extracellular solute-binding protein, family 5. | 0.696 |
RPB_0130 | RPB_1650 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.552 |
RPB_0130 | RPB_3132 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.551 |
RPB_0851 | RPB_1041 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Extracellular solute-binding protein, family 5. | 0.733 |
RPB_1038 | RPB_0130 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.751 |
RPB_1038 | RPB_1039 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.948 |
RPB_1038 | RPB_1040 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.910 |
RPB_1038 | RPB_1041 | ABC transporter related; Belongs to the ABC transporter superfamily. | Extracellular solute-binding protein, family 5. | 0.767 |
RPB_1038 | RPB_1649 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.790 |
RPB_1038 | RPB_1650 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.581 |
RPB_1038 | RPB_3080 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.792 |
RPB_1038 | RPB_3131 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.772 |
RPB_1038 | RPB_3132 | ABC transporter related; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.600 |
RPB_1039 | RPB_1038 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter related; Belongs to the ABC transporter superfamily. | 0.948 |
RPB_1039 | RPB_1040 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.968 |
RPB_1039 | RPB_1041 | Binding-protein-dependent transport systems inner membrane component. | Extracellular solute-binding protein, family 5. | 0.940 |
RPB_1039 | RPB_1650 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.850 |
RPB_1039 | RPB_3132 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.850 |
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