STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_1148Alcohol dehydrogenase superfamily, zinc-containing. (339 aa)    
Predicted Functional Partners:
RPB_2474
Alcohol dehydrogenase, zinc-containing.
 
 
 0.953
RPB_3806
Alcohol dehydrogenase superfamily, zinc-containing.
 
  
 0.936
RPB_1871
Alcohol dehydrogenase superfamily, zinc-containing.
 
 
0.926
RPB_3249
Aldehyde dehydrogenase.
   
 0.912
RPB_3418
Alcohol dehydrogenase superfamily, zinc-containing; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.905
RPB_0946
Iron-containing alcohol dehydrogenase.
     
 0.904
RPB_0104
Amine oxidase.
    
 0.903
RPB_1149
Phenylacetic acid degradation-related protein.
 
   0.897
RPB_1147
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
       0.732
RPB_1150
Short-chain dehydrogenase/reductase SDR.
  
 
 0.714
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.