Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPB_0158 | RPB_0159 | Putative membrane protein. | Conserved hypothetical protein. | 0.953 |
RPB_0158 | RPB_1246 | Putative membrane protein. | Conserved hypothetical protein. | 0.463 |
RPB_0158 | RPB_1247 | Putative membrane protein. | Protein of unknown function DUF1469. | 0.467 |
RPB_0158 | RPB_1248 | Putative membrane protein. | Conserved hypothetical protein. | 0.542 |
RPB_0159 | RPB_0158 | Conserved hypothetical protein. | Putative membrane protein. | 0.953 |
RPB_0159 | RPB_1246 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.606 |
RPB_0159 | RPB_1247 | Conserved hypothetical protein. | Protein of unknown function DUF1469. | 0.517 |
RPB_0159 | RPB_1248 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.621 |
RPB_1245 | RPB_1246 | Late embryogenesis abundant protein. | Conserved hypothetical protein. | 0.966 |
RPB_1245 | RPB_1247 | Late embryogenesis abundant protein. | Protein of unknown function DUF1469. | 0.946 |
RPB_1245 | RPB_1248 | Late embryogenesis abundant protein. | Conserved hypothetical protein. | 0.902 |
RPB_1245 | RPB_1249 | Late embryogenesis abundant protein. | Ribonuclease BN, putative. | 0.456 |
RPB_1245 | RPB_1385 | Late embryogenesis abundant protein. | Signal transduction histidine kinase. | 0.694 |
RPB_1245 | RPB_2675 | Late embryogenesis abundant protein. | Protein of unknown function UPF0118. | 0.424 |
RPB_1246 | RPB_0158 | Conserved hypothetical protein. | Putative membrane protein. | 0.463 |
RPB_1246 | RPB_0159 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.606 |
RPB_1246 | RPB_1245 | Conserved hypothetical protein. | Late embryogenesis abundant protein. | 0.966 |
RPB_1246 | RPB_1247 | Conserved hypothetical protein. | Protein of unknown function DUF1469. | 0.974 |
RPB_1246 | RPB_1248 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.975 |
RPB_1246 | RPB_1249 | Conserved hypothetical protein. | Ribonuclease BN, putative. | 0.674 |
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