STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_1701DNA-N1-methyladenine dioxygenase. (223 aa)    
Predicted Functional Partners:
RPB_1700
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.777
RPB_1698
Protein of unknown function UPF0153.
 
     0.595
RPB_1702
Major facilitator superfamily MFS_1.
       0.588
RPB_1699
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
       0.573
RPB_0018
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.538
RPB_0218
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.538
RPB_3431
2-dehydropantoate 2-reductase.
   
    0.538
RPB_3888
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.538
RPB_0813
HhH-GPD.
     
 0.423
RPB_0437
DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / transcriptional regulator, AraC family.
  
  
 0.421
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.