STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_1819Transcriptional regulator, LuxR family. (339 aa)    
Predicted Functional Partners:
RPB_4224
Hpt sensor hybrid histidine kinase.
  
 
 0.876
RPB_3852
Hpt sensor hybrid histidine kinase.
  
 
 0.872
RPB_3064
Putative signal transduction histidine kinase.
 
 
 0.793
RPB_4453
Response regulator receiver sensor signal transduction histidine kinase.
  
 
 0.718
RPB_1820
Amidase; Belongs to the amidase family.
       0.570
RPB_4564
Periplasmic sensor hybrid histidine kinase.
  
 
 0.513
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.489
RPB_0183
Serine/threonine protein kinase and signal transduction histidine kinase.
  
 
 0.482
RPB_0214
GAF sensor signal transduction histidine kinase.
  
 
 0.482
RPB_0891
Adenylate/guanylate cyclase.
  
 
 0.456
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.