STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_2020Protein of unknown function UPF0150. (96 aa)    
Predicted Functional Partners:
RPB_2021
YcfA-like.
 
 
 
 0.966
RPB_2527
YcfA-like.
 
 
 
 0.855
RPB_4319
YcfA-like.
 
 
 
 0.853
RPB_4320
Protein of unknown function UPF0150.
  
     0.749
RPB_2022
Protein of unknown function UPF0150.
 
    
0.543
RPB_4579
YcfA-like.
 
 
 
 0.532
RPB_2018
ABC-2.
       0.503
RPB_2019
ABC transporter related.
       0.500
RPB_2023
ATP-dependent DNA helicase, Rep family.
       0.499
RPB_4580
Protein of unknown function UPF0150.
  
     0.430
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.