STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_2112Transcriptional regulator, IclR family. (322 aa)    
Predicted Functional Partners:
RPB_2267
Transcriptional regulator, IclR family.
  
     0.756
RPB_4406
Transcriptional regulator, IclR family.
  
     0.747
RPB_2110
TRAP transporter solute receptor, TAXI family.
 
     0.677
RPB_2832
Conserved hypothetical protein.
  
    0.634
RPB_2109
TRAP transporter, 4TM/12TM fusion protein.
 
     0.584
RPB_2833
Allophanate hydrolase subunit 2.
  
    0.549
RPB_2111
Hypothetical protein.
       0.488
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.