STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_3453Periplasmic sensor signal transduction histidine kinase. (464 aa)    
Predicted Functional Partners:
RPB_3454
Two component transcriptional regulator, winged helix family.
 
 0.946
RPB_2770
Transketolase-like; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.893
RPB_4224
Hpt sensor hybrid histidine kinase.
  
 
 0.859
RPB_4694
Two component transcriptional regulator, winged helix family.
 
 0.805
RPB_0712
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.721
RPB_3455
Hypothetical protein.
       0.652
RPB_3456
Glycohydrolase.
       0.649
RPB_1857
Conserved hypothetical protein.
  
     0.648
RPB_0624
PAS/PAC sensor signal transduction histidine kinase.
 
 
 
 0.618
RPB_1250
Two component transcriptional regulator, LuxR family.
  
 
 0.590
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.