Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPB_1269 | RPB_3824 | UspA. | UspA. | 0.423 |
RPB_1369 | RPB_3824 | Conserved hypothetical protein. | UspA. | 0.410 |
RPB_3654 | RPB_3824 | PfkB; Belongs to the carbohydrate kinase PfkB family. | UspA. | 0.451 |
RPB_3822 | RPB_3823 | FAD dependent oxidoreductase. | Putative phosphohistidine phosphatase, SixA. | 0.626 |
RPB_3822 | RPB_3824 | FAD dependent oxidoreductase. | UspA. | 0.413 |
RPB_3823 | RPB_3822 | Putative phosphohistidine phosphatase, SixA. | FAD dependent oxidoreductase. | 0.626 |
RPB_3823 | RPB_3824 | Putative phosphohistidine phosphatase, SixA. | UspA. | 0.508 |
RPB_3824 | RPB_1269 | UspA. | UspA. | 0.423 |
RPB_3824 | RPB_1369 | UspA. | Conserved hypothetical protein. | 0.410 |
RPB_3824 | RPB_3654 | UspA. | PfkB; Belongs to the carbohydrate kinase PfkB family. | 0.451 |
RPB_3824 | RPB_3822 | UspA. | FAD dependent oxidoreductase. | 0.413 |
RPB_3824 | RPB_3823 | UspA. | Putative phosphohistidine phosphatase, SixA. | 0.508 |
RPB_3824 | RPB_4506 | UspA. | Flavoprotein WrbA. | 0.407 |
RPB_4506 | RPB_3824 | Flavoprotein WrbA. | UspA. | 0.407 |