Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPB_0077 | RPB_2078 | RPB_0077 | RPB_2078 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.686 |
RPB_0077 | RPB_2966 | RPB_0077 | RPB_2966 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.957 |
RPB_0077 | RPB_3958 | RPB_0077 | RPB_3958 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.553 |
RPB_0077 | RPB_4253 | RPB_0077 | RPB_4253 | Aspartate kinase; Belongs to the aspartokinase family. | Chorismate mutase. | 0.441 |
RPB_0077 | asd | RPB_0077 | RPB_0338 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.993 |
RPB_0077 | dapA-2 | RPB_0077 | RPB_4525 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthetase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.580 |
RPB_0077 | dapB | RPB_0077 | RPB_0435 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.789 |
RPB_2078 | RPB_0077 | RPB_2078 | RPB_0077 | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.686 |
RPB_2078 | RPB_2966 | RPB_2078 | RPB_2966 | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Homoserine dehydrogenase. | 0.434 |
RPB_2078 | RPB_3958 | RPB_2078 | RPB_3958 | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.578 |
RPB_2078 | asd | RPB_2078 | RPB_0338 | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.630 |
RPB_2078 | dapA-2 | RPB_2078 | RPB_4525 | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Dihydrodipicolinate synthetase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.741 |
RPB_2078 | dapB | RPB_2078 | RPB_0435 | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.742 |
RPB_2966 | RPB_0077 | RPB_2966 | RPB_0077 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.957 |
RPB_2966 | RPB_2078 | RPB_2966 | RPB_2078 | Homoserine dehydrogenase. | Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.434 |
RPB_2966 | RPB_3958 | RPB_2966 | RPB_3958 | Homoserine dehydrogenase. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.934 |
RPB_2966 | asd | RPB_2966 | RPB_0338 | Homoserine dehydrogenase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.972 |
RPB_2966 | dapA-2 | RPB_2966 | RPB_4525 | Homoserine dehydrogenase. | Dihydrodipicolinate synthetase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.930 |
RPB_2966 | dapB | RPB_2966 | RPB_0435 | Homoserine dehydrogenase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.677 |
RPB_3958 | RPB_0077 | RPB_3958 | RPB_0077 | Dihydrodipicolinate synthetase; Belongs to the DapA family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.553 |
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