Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPB_0428 | RPB_0502 | Conserved hypothetical protein. | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.516 |
RPB_0428 | RPB_0839 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.706 |
RPB_0428 | RPB_0846 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.734 |
RPB_0428 | RPB_1331 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.701 |
RPB_0428 | RPB_2143 | Conserved hypothetical protein. | Conserved hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.516 |
RPB_0428 | RPB_3001 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.727 |
RPB_0428 | RPB_3036 | Conserved hypothetical protein. | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.520 |
RPB_0428 | RPB_3514 | Conserved hypothetical protein. | Peptidoglycan-binding domain 1. | 0.645 |
RPB_0428 | RPB_4180 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.750 |
RPB_0428 | RPB_4188 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.686 |
RPB_0502 | RPB_0428 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.516 |
RPB_0502 | RPB_0839 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.755 |
RPB_0502 | RPB_0846 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.623 |
RPB_0502 | RPB_1331 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.769 |
RPB_0502 | RPB_2143 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.549 |
RPB_0502 | RPB_3001 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.662 |
RPB_0502 | RPB_3036 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.543 |
RPB_0502 | RPB_3514 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Peptidoglycan-binding domain 1. | 0.762 |
RPB_0502 | RPB_4180 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.772 |
RPB_0502 | RPB_4188 | Putative Omp2b porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Conserved hypothetical protein. | 0.759 |
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