Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPB_0306 | RPB_1915 | RPB_0306 | RPB_1915 | Rhodanese-like. | 3-mercaptopyruvate sulfurtransferase. | 0.926 |
RPB_0306 | RPB_4367 | RPB_0306 | RPB_4367 | Rhodanese-like. | Sulfur dehydrogenase subunit SoxD. | 0.906 |
RPB_0306 | RPB_4368 | RPB_0306 | RPB_4368 | Rhodanese-like. | Sulfur dehydrogenase subunit SoxC. | 0.913 |
RPB_0306 | RPB_4369 | RPB_0306 | RPB_4369 | Rhodanese-like. | Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family. | 0.910 |
RPB_0306 | RPB_4370 | RPB_0306 | RPB_4370 | Rhodanese-like. | Sulfur compound chelating protein SoxZ. | 0.913 |
RPB_0306 | RPB_4371 | RPB_0306 | RPB_4371 | Rhodanese-like. | Thiosulfate-binding protein SoxY. | 0.914 |
RPB_0306 | RPB_4372 | RPB_0306 | RPB_4372 | Rhodanese-like. | Conserved hypothetical protein. | 0.912 |
RPB_0306 | RPB_4373 | RPB_0306 | RPB_4373 | Rhodanese-like. | Conserved hypothetical protein. | 0.905 |
RPB_0306 | cysC | RPB_0306 | RPB_1042 | Rhodanese-like. | Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. | 0.521 |
RPB_1043 | RPB_4367 | RPB_1043 | RPB_4367 | Sulfate adenylyltransferase subunit 2. | Sulfur dehydrogenase subunit SoxD. | 0.905 |
RPB_1043 | RPB_4368 | RPB_1043 | RPB_4368 | Sulfate adenylyltransferase subunit 2. | Sulfur dehydrogenase subunit SoxC. | 0.908 |
RPB_1043 | RPB_4369 | RPB_1043 | RPB_4369 | Sulfate adenylyltransferase subunit 2. | Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family. | 0.905 |
RPB_1043 | RPB_4370 | RPB_1043 | RPB_4370 | Sulfate adenylyltransferase subunit 2. | Sulfur compound chelating protein SoxZ. | 0.916 |
RPB_1043 | RPB_4371 | RPB_1043 | RPB_4371 | Sulfate adenylyltransferase subunit 2. | Thiosulfate-binding protein SoxY. | 0.916 |
RPB_1043 | RPB_4372 | RPB_1043 | RPB_4372 | Sulfate adenylyltransferase subunit 2. | Conserved hypothetical protein. | 0.905 |
RPB_1043 | RPB_4373 | RPB_1043 | RPB_4373 | Sulfate adenylyltransferase subunit 2. | Conserved hypothetical protein. | 0.904 |
RPB_1043 | cysC | RPB_1043 | RPB_1042 | Sulfate adenylyltransferase subunit 2. | Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. | 0.999 |
RPB_1915 | RPB_0306 | RPB_1915 | RPB_0306 | 3-mercaptopyruvate sulfurtransferase. | Rhodanese-like. | 0.926 |
RPB_1915 | RPB_4367 | RPB_1915 | RPB_4367 | 3-mercaptopyruvate sulfurtransferase. | Sulfur dehydrogenase subunit SoxD. | 0.906 |
RPB_1915 | RPB_4368 | RPB_1915 | RPB_4368 | 3-mercaptopyruvate sulfurtransferase. | Sulfur dehydrogenase subunit SoxC. | 0.913 |
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