Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPB_0670 | RPB_4457 | RPB_0670 | RPB_4457 | NUDIX hydrolase. | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | 0.916 |
RPB_0670 | surE | RPB_0670 | RPB_2739 | NUDIX hydrolase. | Exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.911 |
RPB_3693 | RPB_4457 | RPB_3693 | RPB_4457 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | 0.913 |
RPB_3693 | apt | RPB_3693 | RPB_4317 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.963 |
RPB_3693 | guaA | RPB_3693 | RPB_3189 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.935 |
RPB_3693 | guaB | RPB_3693 | RPB_3193 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.855 |
RPB_3693 | purA | RPB_3693 | RPB_1330 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.996 |
RPB_3693 | purH | RPB_3693 | RPB_0084 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.991 |
RPB_3693 | surE | RPB_3693 | RPB_2739 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.933 |
RPB_3693 | tmk | RPB_3693 | RPB_2679 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.514 |
RPB_4270 | RPB_4457 | RPB_4270 | RPB_4457 | Cytidine deaminase. | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | 0.909 |
RPB_4270 | guaA | RPB_4270 | RPB_3189 | Cytidine deaminase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.469 |
RPB_4270 | surE | RPB_4270 | RPB_2739 | Cytidine deaminase. | Exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.914 |
RPB_4457 | RPB_0670 | RPB_4457 | RPB_0670 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | NUDIX hydrolase. | 0.916 |
RPB_4457 | RPB_3693 | RPB_4457 | RPB_3693 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.913 |
RPB_4457 | RPB_4270 | RPB_4457 | RPB_4270 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | Cytidine deaminase. | 0.909 |
RPB_4457 | apt | RPB_4457 | RPB_4317 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.915 |
RPB_4457 | guaA | RPB_4457 | RPB_3189 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.919 |
RPB_4457 | guaB | RPB_4457 | RPB_3193 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.907 |
RPB_4457 | purA | RPB_4457 | RPB_1330 | 5'-Nucleotidase-like protein; Belongs to the 5'-nucleotidase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.913 |
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