STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_4706Response regulator receiver modulated metal dependent phosphohydrolase. (368 aa)    
Predicted Functional Partners:
RPB_2330
Metal dependent phosphohydrolase.
 
  
 0.817
RPB_3230
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
   
 0.773
RPB_0384
Diguanylate cyclase.
 
 
 0.739
RPB_3874
Diguanylate cyclase.
 
 
 0.700
RPB_2360
Diguanylate cyclase.
 
 
 0.696
RPB_3550
Diguanylate cyclase.
 
   
 0.691
RPB_1028
Diguanylate cyclase.
 
 
 0.678
RPB_1912
Diguanylate cyclase with PAS/PAC sensor.
 
 
 0.670
RPB_2986
Diguanylate cyclase.
 
 
 0.668
RPB_2521
Diguanylate cyclase.
 
 
 0.665
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.