Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_0035KilA-N domain DNA-binding protein. (284 aa)    
Predicted Functional Partners:
cbiG
cobalt-precorrin-5A hydrolase.
       0.545
Geob_0037
Hypothetical protein.
       0.507
cbiH/cbiP
Cobalt-precorrin-3 C17-methyltransferase and adenosylcobyric acid synthetase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.507
cbiB
Adenosylcobinamide-phosphate synthetase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.485
cobD
L-threonine-O-3-phosphate decarboxylase.
       0.482
Geob_3412
RhuM family protein.
 
     0.449
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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