Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
bamO/etfB-4Electron transfer flavoprotein, beta subunit. (258 aa)    
Predicted Functional Partners:
bamP/etfA-4
Electron transfer flavoprotein, alpha subunit.
 0.994
etfA-2
Electron transfer flavoprotein, alpha subunit.
 0.993
etfA-3
Electron transfer flavoprotein, alpha subunit.
 0.993
etfA-5
Electron transfer flavoprotein, alpha subunit.
 0.978
pcmB
FAD-binding pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.860
fadE
Very-long-chain acyl-CoA dehydrogenase.
 
 
 0.832
Geob_2191
Short-chain acyl-CoA dehydrogenase.
 
 
 0.813
Geob_2190
Short-chain acyl-CoA dehydrogenase.
 
 
 0.805
Geob_2186
Short-chain acyl-CoA dehydrogenase.
 
 
 0.798
bbsG
(R)-benzylsuccinyl-CoA dehydrogenase.
 
 
 0.779
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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