Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
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Co-expression
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[Homology]
Score
bamP/etfA-4Electron transfer flavoprotein, alpha subunit. (303 aa)    
Predicted Functional Partners:
bamO/etfB-4
Electron transfer flavoprotein, beta subunit.
 0.994
etfB-3
Electron transfer flavoprotein, beta subunit.
 0.974
etfB-2
Electron transfer flavoprotein, beta subunit.
 0.973
etfB-5
Electron transfer flavoprotein, beta subunit.
 
 0.965
Geob_2186
Short-chain acyl-CoA dehydrogenase.
 
 0.925
Geob_2191
Short-chain acyl-CoA dehydrogenase.
 
 0.888
Geob_2190
Short-chain acyl-CoA dehydrogenase.
 
 0.879
fadE
Very-long-chain acyl-CoA dehydrogenase.
 
 0.865
Geob_0237
glutaryl-CoA dehydrogenase, non-decarboxylating.
 
 0.852
bbsG
(R)-benzylsuccinyl-CoA dehydrogenase.
 
 0.828
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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