Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cooS-1Carbon monoxide dehydrogenase, catalytic subunit. (675 aa)    
Predicted Functional Partners:
Geob_2236
Thioredoxin-like domain and zinc finger protein.
  
  
  0.936
sfrB
NADPH oxidoreductase, beta subunit.
 
  
 0.925
cooF
Carbon monoxide dehydrogenase-associated iron-sulfur cluster-binding oxidoreductase CooF.
 
  
 0.923
cooS-2
Carbon monoxide dehydrogenase, catalytic subunit.
  
  
 
0.915
hdrD
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit D.
  
  
 0.914
sfrA
NADPH oxidoreductase, alpha subunit.
    
 0.905
Geob_3278
NADPH-dependent glutamate synthase, iron-sulfur cluster-binding subunit.
    
 0.903
Geob_0149
Bis-(molybdopterin guanine dinucleotide)-oxotungsten-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.902
Geob_0361
ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates.
 
   
 0.846
cooC
Carbon monoxide dehydrogenase accessory protein CooC.
 
   
 0.829
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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