Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Geob_0571ABC transporter, membrane protein. (387 aa)    
Predicted Functional Partners:
Geob_0570
ABC transporter, ATP-binding protein.
 
 0.973
Geob_2109
ABC transporter, ATP-binding protein.
 
 0.900
Geob_3518
ABC transporter, ATP-binding protein.
 
 0.895
Geob_2556
ABC transporter, ATP-binding protein.
 
 0.880
Geob_0063
ABC transporter, ATP-binding protein.
 
 0.833
lolD-2
Lipoprotein release ABC transporter, ATP-binding protein.
 
 0.829
lolD-1
Lipoprotein release ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.816
Geob_0572
Hypothetical protein.
       0.789
Geob_0734
ABC transporter, ATP-binding protein.
 
 0.771
Geob_2355
ABC transporter, ATP-binding protein.
 
 0.761
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.