Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Geob_1666 | Geob_2765 | Geob_1666 | Geob_2765 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Phosphoglycerate mutase family protein. | 0.827 |
Geob_1666 | Geob_3657 | Geob_1666 | Geob_3657 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Aldehyde dehydrogenase family 11 protein. | 0.842 |
Geob_1666 | eno | Geob_1666 | Geob_3099 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.972 |
Geob_1666 | gpmI | Geob_1666 | Geob_0612 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.882 |
Geob_1666 | pgi | Geob_1666 | Geob_1498 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.900 |
Geob_1666 | pgk | Geob_1666 | Geob_2898 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.870 |
Geob_1666 | tpi | Geob_1666 | Geob_2899 | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.976 |
Geob_1934 | Geob_3346 | Geob_1934 | Geob_3346 | RNA-binding protein. | Lipoprotein, putative. | 0.911 |
Geob_1934 | gpmI | Geob_1934 | Geob_0612 | RNA-binding protein. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.952 |
Geob_2765 | Geob_1666 | Geob_2765 | Geob_1666 | Phosphoglycerate mutase family protein. | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | 0.827 |
Geob_2765 | Geob_3657 | Geob_2765 | Geob_3657 | Phosphoglycerate mutase family protein. | Aldehyde dehydrogenase family 11 protein. | 0.909 |
Geob_2765 | eno | Geob_2765 | Geob_3099 | Phosphoglycerate mutase family protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.922 |
Geob_2765 | gpmI | Geob_2765 | Geob_0612 | Phosphoglycerate mutase family protein. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.919 |
Geob_2765 | pgi | Geob_2765 | Geob_1498 | Phosphoglycerate mutase family protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.827 |
Geob_2765 | pgk | Geob_2765 | Geob_2898 | Phosphoglycerate mutase family protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.923 |
Geob_2765 | serA | Geob_2765 | Geob_3435 | Phosphoglycerate mutase family protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.903 |
Geob_3346 | Geob_1934 | Geob_3346 | Geob_1934 | Lipoprotein, putative. | RNA-binding protein. | 0.911 |
Geob_3346 | gpmI | Geob_3346 | Geob_0612 | Lipoprotein, putative. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.928 |
Geob_3346 | pgk | Geob_3346 | Geob_2898 | Lipoprotein, putative. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.473 |
Geob_3657 | Geob_1666 | Geob_3657 | Geob_1666 | Aldehyde dehydrogenase family 11 protein. | Glucose-6-phosphate isomerase, putative; Belongs to the GPI family. | 0.842 |
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