Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_0613Iron-sulfur cluster-binding flavoprotein. (222 aa)    
Predicted Functional Partners:
Geob_0614
Protein of unknown function DUF162.
 
     0.753
Geob_0615
Amidophosphoribosyltransferase, putative.
       0.712
Geob_0394
ATPase, AAA family.
   
    0.507
prkA
Protein serine/threonine kinase PrkA.
   
    0.507
Geob_1376
Iron-sulfur cluster-binding oxidoreductase.
 
   
 0.504
Geob_3351
Iron-sulfur cluster-binding oxidoreductase.
 
     0.497
Geob_0291
Lipoprotein, putative.
   
    0.495
Geob_2038
Hypothetical protein.
   
    0.495
Geob_3684
Hypothetical protein.
   
    0.495
ppcC
Cytochrome c, 3 heme-binding sites.
       0.492
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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